Dataset statistics
| Number of variables | 16 |
|---|---|
| Number of observations | 4262 |
| Missing cells | 4 |
| Missing cells (%) | < 0.1% |
| Duplicate rows | 0 |
| Duplicate rows (%) | 0.0% |
| Total size in memory | 532.9 KiB |
| Average record size in memory | 128.0 B |
Variable types
| Categorical | 1 |
|---|---|
| Numeric | 15 |
begin is highly correlated with end | High correlation |
end is highly correlated with begin | High correlation |
length_gene is highly correlated with per_gene | High correlation |
length_rpt is highly correlated with length_LINE and 6 other fields | High correlation |
length_LINE is highly correlated with length_rpt and 3 other fields | High correlation |
length_SINE is highly correlated with length_rpt and 4 other fields | High correlation |
length_DNA is highly correlated with per_DNA and 2 other fields | High correlation |
length_LTR is highly correlated with length_rpt and 3 other fields | High correlation |
per_DNA is highly correlated with length_DNA and 2 other fields | High correlation |
per_SINE is highly correlated with length_rpt and 6 other fields | High correlation |
per_LTR is highly correlated with length_rpt and 8 other fields | High correlation |
per_LINE is highly correlated with length_rpt and 6 other fields | High correlation |
per_length is highly correlated with length_rpt and 6 other fields | High correlation |
per_gene is highly correlated with length_gene | High correlation |
begin is highly correlated with end | High correlation |
end is highly correlated with begin | High correlation |
length_gene is highly correlated with per_gene | High correlation |
length_rpt is highly correlated with length_LINE and 5 other fields | High correlation |
length_LINE is highly correlated with length_rpt and 2 other fields | High correlation |
length_SINE is highly correlated with per_SINE and 1 other fields | High correlation |
length_DNA is highly correlated with per_DNA and 2 other fields | High correlation |
length_LTR is highly correlated with length_rpt and 3 other fields | High correlation |
per_DNA is highly correlated with length_DNA and 2 other fields | High correlation |
per_SINE is highly correlated with length_rpt and 4 other fields | High correlation |
per_LTR is highly correlated with length_rpt and 7 other fields | High correlation |
per_LINE is highly correlated with length_rpt and 4 other fields | High correlation |
per_length is highly correlated with length_rpt and 4 other fields | High correlation |
per_gene is highly correlated with length_gene | High correlation |
begin is highly correlated with end and 1 other fields | High correlation |
end is highly correlated with begin and 1 other fields | High correlation |
length_gene is highly correlated with block_len and 1 other fields | High correlation |
length_rpt is highly correlated with length_LINE and 4 other fields | High correlation |
length_LINE is highly correlated with length_rpt and 3 other fields | High correlation |
length_SINE is highly correlated with block_len and 2 other fields | High correlation |
length_DNA is highly correlated with block_len and 1 other fields | High correlation |
length_LTR is highly correlated with block_len | High correlation |
block_len is highly correlated with begin and 7 other fields | High correlation |
per_DNA is highly correlated with length_DNA | High correlation |
per_SINE is highly correlated with length_SINE and 2 other fields | High correlation |
per_LTR is highly correlated with length_rpt and 4 other fields | High correlation |
per_LINE is highly correlated with length_rpt and 4 other fields | High correlation |
per_length is highly correlated with length_rpt and 3 other fields | High correlation |
per_gene is highly correlated with length_gene | High correlation |
chrom is highly correlated with length_rpt and 7 other fields | High correlation |
begin is highly correlated with end | High correlation |
end is highly correlated with begin | High correlation |
length_gene is highly correlated with per_gene | High correlation |
length_rpt is highly correlated with chrom and 7 other fields | High correlation |
length_LINE is highly correlated with chrom and 6 other fields | High correlation |
length_SINE is highly correlated with chrom and 6 other fields | High correlation |
length_DNA is highly correlated with per_DNA and 2 other fields | High correlation |
length_LTR is highly correlated with chrom and 5 other fields | High correlation |
per_DNA is highly correlated with length_DNA and 2 other fields | High correlation |
per_SINE is highly correlated with chrom and 8 other fields | High correlation |
per_LTR is highly correlated with chrom and 8 other fields | High correlation |
per_LINE is highly correlated with chrom and 7 other fields | High correlation |
per_length is highly correlated with chrom and 7 other fields | High correlation |
per_gene is highly correlated with length_gene | High correlation |
length_gene has 1012 (23.7%) zeros | Zeros |
length_LTR has 90 (2.1%) zeros | Zeros |
per_gene has 1012 (23.7%) zeros | Zeros |
Reproduction
| Analysis started | 2022-02-23 12:49:16.171498 |
|---|---|
| Analysis finished | 2022-02-23 12:49:59.679621 |
| Duration | 43.51 seconds |
| Software version | pandas-profiling v3.1.0 |
| Download configuration | config.json |
| Distinct | 32 |
|---|---|
| Distinct (%) | 0.8% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 33.4 KiB |
| LR999924.1 | 171 |
|---|---|
| LR999925.1 | 167 |
| LR999926.1 | 164 |
| LR999927.1 | 161 |
| LR999928.1 | 161 |
| Other values (27) |
Length
| Max length | 10 |
|---|---|
| Median length | 10 |
| Mean length | 10 |
| Min length | 10 |
Characters and Unicode
| Total characters | 0 |
|---|---|
| Distinct characters | 0 |
| Distinct categories | 0 ? |
| Distinct scripts | 0 ? |
| Distinct blocks | 0 ? |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | LR999924.1 |
|---|---|
| 2nd row | LR999924.1 |
| 3rd row | LR999924.1 |
| 4th row | LR999924.1 |
| 5th row | LR999924.1 |
Common Values
| Value | Count | Frequency (%) |
| LR999924.1 | 171 | 4.0% |
| LR999925.1 | 167 | 3.9% |
| LR999926.1 | 164 | 3.8% |
| LR999927.1 | 161 | 3.8% |
| LR999928.1 | 161 | 3.8% |
| LR999929.1 | 160 | 3.8% |
| LR999930.1 | 158 | 3.7% |
| LR999931.1 | 156 | 3.7% |
| LR999932.1 | 155 | 3.6% |
| LR999933.1 | 153 | 3.6% |
| Other values (22) | 2656 |
Length
| Value | Count | Frequency (%) |
| lr999924.1 | 171 | 4.0% |
| lr999925.1 | 167 | 3.9% |
| lr999926.1 | 164 | 3.8% |
| lr999927.1 | 161 | 3.8% |
| lr999928.1 | 161 | 3.8% |
| lr999929.1 | 160 | 3.8% |
| lr999930.1 | 158 | 3.7% |
| lr999931.1 | 156 | 3.7% |
| lr999932.1 | 155 | 3.6% |
| lr999933.1 | 153 | 3.6% |
| Other values (22) | 2656 |
Most occurring characters
| Value | Count | Frequency (%) |
| No values found. | ||
Most occurring categories
| Value | Count | Frequency (%) |
| No values found. | ||
Most frequent character per category
Most occurring scripts
| Value | Count | Frequency (%) |
| No values found. | ||
Most frequent character per script
Most occurring blocks
| Value | Count | Frequency (%) |
| No values found. | ||
Most frequent character per block
| Distinct | 171 |
|---|---|
| Distinct (%) | 4.0% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 6916096.73 |
| Minimum | 1 |
|---|---|
| Maximum | 17000001 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 1 |
|---|---|
| 5-th percentile | 600001 |
| Q1 | 3300001 |
| median | 6600001 |
| Q3 | 10300001 |
| 95-th percentile | 14200001 |
| Maximum | 17000001 |
| Range | 17000000 |
| Interquartile range (IQR) | 7000000 |
Descriptive statistics
| Standard deviation | 4271589.444 |
|---|---|
| Coefficient of variation (CV) | 0.6176300897 |
| Kurtosis | -1.002387132 |
| Mean | 6916096.73 |
| Median Absolute Deviation (MAD) | 3500000 |
| Skewness | 0.2182060007 |
| Sum | 2.947640426 × 1010 |
| Variance | 1.824647637 × 1013 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 1 | 32 | 0.8% |
| 4800001 | 32 | 0.8% |
| 3400001 | 32 | 0.8% |
| 3500001 | 32 | 0.8% |
| 3600001 | 32 | 0.8% |
| 3700001 | 32 | 0.8% |
| 3800001 | 32 | 0.8% |
| 3900001 | 32 | 0.8% |
| 4000001 | 32 | 0.8% |
| 4100001 | 32 | 0.8% |
| Other values (161) | 3942 |
| Value | Count | Frequency (%) |
| 1 | 32 | |
| 100001 | 32 | |
| 200001 | 32 | |
| 300001 | 32 | |
| 400001 | 32 | |
| 500001 | 32 | |
| 600001 | 32 | |
| 700001 | 32 | |
| 800001 | 32 | |
| 900001 | 32 |
| Value | Count | Frequency (%) |
| 17000001 | 1 | < 0.1% |
| 16900001 | 1 | < 0.1% |
| 16800001 | 1 | < 0.1% |
| 16700001 | 1 | < 0.1% |
| 16600001 | 2 | |
| 16500001 | 2 | |
| 16400001 | 2 | |
| 16300001 | 3 | |
| 16200001 | 3 | |
| 16100001 | 3 |
| Distinct | 202 |
|---|---|
| Distinct (%) | 4.7% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 7015715.099 |
| Minimum | 100000 |
|---|---|
| Maximum | 17040296 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 100000 |
|---|---|
| 5-th percentile | 700000 |
| Q1 | 3400000 |
| median | 6700000 |
| Q3 | 10400000 |
| 95-th percentile | 14300000 |
| Maximum | 17040296 |
| Range | 16940296 |
| Interquartile range (IQR) | 7000000 |
Descriptive statistics
| Standard deviation | 4270989.261 |
|---|---|
| Coefficient of variation (CV) | 0.6087746154 |
| Kurtosis | -1.003096817 |
| Mean | 7015715.099 |
| Median Absolute Deviation (MAD) | 3500000 |
| Skewness | 0.2178064853 |
| Sum | 2.990097775 × 1010 |
| Variance | 1.824134927 × 1013 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 100000 | 32 | 0.8% |
| 4700000 | 32 | 0.8% |
| 3400000 | 32 | 0.8% |
| 3500000 | 32 | 0.8% |
| 3600000 | 32 | 0.8% |
| 3700000 | 32 | 0.8% |
| 3800000 | 32 | 0.8% |
| 3900000 | 32 | 0.8% |
| 4000000 | 32 | 0.8% |
| 4100000 | 32 | 0.8% |
| Other values (192) | 3942 |
| Value | Count | Frequency (%) |
| 100000 | 32 | |
| 200000 | 32 | |
| 300000 | 32 | |
| 400000 | 32 | |
| 500000 | 32 | |
| 600000 | 32 | |
| 700000 | 32 | |
| 800000 | 32 | |
| 900000 | 32 | |
| 1000000 | 32 |
| Value | Count | Frequency (%) |
| 17040296 | 1 | |
| 17000000 | 1 | |
| 16900000 | 1 | |
| 16800000 | 1 | |
| 16700000 | 1 | |
| 16607008 | 1 | |
| 16600000 | 2 | |
| 16500000 | 2 | |
| 16400000 | 2 | |
| 16362069 | 1 |
length_gene
Real number (ℝ≥0)
HIGH CORRELATIONHIGH CORRELATIONHIGH CORRELATIONHIGH CORRELATIONZEROS| Distinct | 2821 |
|---|---|
| Distinct (%) | 66.2% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 3703.10488 |
| Minimum | 0 |
|---|---|
| Maximum | 26501 |
| Zeros | 1012 |
| Zeros (%) | 23.7% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 0 |
| Q1 | 202.25 |
| median | 2201.5 |
| Q3 | 5627.5 |
| 95-th percentile | 12723.3 |
| Maximum | 26501 |
| Range | 26501 |
| Interquartile range (IQR) | 5425.25 |
Descriptive statistics
| Standard deviation | 4351.954525 |
|---|---|
| Coefficient of variation (CV) | 1.175217734 |
| Kurtosis | 3.037885145 |
| Mean | 3703.10488 |
| Median Absolute Deviation (MAD) | 2201.5 |
| Skewness | 1.658515686 |
| Sum | 15782633 |
| Variance | 18939508.19 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 1012 | 23.7% |
| 1164 | 5 | 0.1% |
| 635 | 4 | 0.1% |
| 2324 | 4 | 0.1% |
| 488 | 4 | 0.1% |
| 1180 | 4 | 0.1% |
| 381 | 4 | 0.1% |
| 1702 | 4 | 0.1% |
| 2274 | 4 | 0.1% |
| 683 | 4 | 0.1% |
| Other values (2811) | 3213 |
| Value | Count | Frequency (%) |
| 0 | 1012 | |
| 9 | 1 | < 0.1% |
| 10 | 1 | < 0.1% |
| 11 | 1 | < 0.1% |
| 12 | 2 | < 0.1% |
| 15 | 1 | < 0.1% |
| 18 | 1 | < 0.1% |
| 20 | 1 | < 0.1% |
| 21 | 2 | < 0.1% |
| 22 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 26501 | 1 | |
| 26157 | 1 | |
| 26038 | 1 | |
| 25794 | 1 | |
| 25601 | 1 | |
| 24430 | 1 | |
| 24376 | 1 | |
| 24126 | 1 | |
| 23849 | 1 | |
| 23845 | 1 |
| Distinct | 4083 |
|---|---|
| Distinct (%) | 95.8% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 37262.81065 |
| Minimum | 0 |
|---|---|
| Maximum | 96531 |
| Zeros | 1 |
| Zeros (%) | < 0.1% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 17122.9 |
| Q1 | 27134.25 |
| median | 36186.5 |
| Q3 | 45876.75 |
| 95-th percentile | 62368.35 |
| Maximum | 96531 |
| Range | 96531 |
| Interquartile range (IQR) | 18742.5 |
Descriptive statistics
| Standard deviation | 13751.65069 |
|---|---|
| Coefficient of variation (CV) | 0.3690449122 |
| Kurtosis | 0.2351532905 |
| Mean | 37262.81065 |
| Median Absolute Deviation (MAD) | 9365 |
| Skewness | 0.5243842441 |
| Sum | 158814099 |
| Variance | 189107896.6 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 43545 | 3 | 0.1% |
| 28099 | 3 | 0.1% |
| 37623 | 3 | 0.1% |
| 42204 | 3 | 0.1% |
| 29977 | 3 | 0.1% |
| 42620 | 3 | 0.1% |
| 40685 | 3 | 0.1% |
| 24416 | 2 | < 0.1% |
| 21877 | 2 | < 0.1% |
| 27613 | 2 | < 0.1% |
| Other values (4073) | 4235 |
| Value | Count | Frequency (%) |
| 0 | 1 | |
| 742 | 1 | |
| 1488 | 1 | |
| 4945 | 1 | |
| 5120 | 1 | |
| 5403 | 1 | |
| 5876 | 1 | |
| 6190 | 1 | |
| 6194 | 1 | |
| 6507 | 1 |
| Value | Count | Frequency (%) |
| 96531 | 1 | |
| 94811 | 1 | |
| 91118 | 1 | |
| 88807 | 1 | |
| 87795 | 1 | |
| 86135 | 1 | |
| 83678 | 1 | |
| 83463 | 1 | |
| 82260 | 1 | |
| 82074 | 1 |
| Distinct | 3885 |
|---|---|
| Distinct (%) | 91.2% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 14882.06898 |
| Minimum | 0 |
|---|---|
| Maximum | 91264 |
| Zeros | 1 |
| Zeros (%) | < 0.1% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 5002.8 |
| Q1 | 9295.5 |
| median | 13447 |
| Q3 | 18548.75 |
| 95-th percentile | 28284.85 |
| Maximum | 91264 |
| Range | 91264 |
| Interquartile range (IQR) | 9253.25 |
Descriptive statistics
| Standard deviation | 8604.772486 |
|---|---|
| Coefficient of variation (CV) | 0.5781973257 |
| Kurtosis | 10.77237867 |
| Mean | 14882.06898 |
| Median Absolute Deviation (MAD) | 4554.5 |
| Skewness | 2.375428347 |
| Sum | 63427378 |
| Variance | 74042109.54 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 18665 | 4 | 0.1% |
| 13451 | 3 | 0.1% |
| 22818 | 3 | 0.1% |
| 12517 | 3 | 0.1% |
| 14935 | 3 | 0.1% |
| 10494 | 3 | 0.1% |
| 21996 | 3 | 0.1% |
| 10981 | 3 | 0.1% |
| 13641 | 3 | 0.1% |
| 16714 | 3 | 0.1% |
| Other values (3875) | 4231 |
| Value | Count | Frequency (%) |
| 0 | 1 | |
| 320 | 1 | |
| 742 | 1 | |
| 872 | 1 | |
| 938 | 1 | |
| 1337 | 1 | |
| 1372 | 1 | |
| 1537 | 1 | |
| 1602 | 1 | |
| 1689 | 1 |
| Value | Count | Frequency (%) |
| 91264 | 1 | |
| 86260 | 1 | |
| 84816 | 1 | |
| 81687 | 1 | |
| 81533 | 1 | |
| 79633 | 1 | |
| 74228 | 1 | |
| 67321 | 1 | |
| 66320 | 1 | |
| 66315 | 1 |
| Distinct | 3546 |
|---|---|
| Distinct (%) | 83.2% |
| Missing | 1 |
| Missing (%) | < 0.1% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 7259.453884 |
| Minimum | 0 |
|---|---|
| Maximum | 19106 |
| Zeros | 24 |
| Zeros (%) | 0.6% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 1528 |
| Q1 | 4864 |
| median | 7279 |
| Q3 | 9607 |
| 95-th percentile | 12813 |
| Maximum | 19106 |
| Range | 19106 |
| Interquartile range (IQR) | 4743 |
Descriptive statistics
| Standard deviation | 3353.091747 |
|---|---|
| Coefficient of variation (CV) | 0.4618931121 |
| Kurtosis | -0.4210047468 |
| Mean | 7259.453884 |
| Median Absolute Deviation (MAD) | 2375 |
| Skewness | 0.04376935262 |
| Sum | 30932533 |
| Variance | 11243224.26 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 24 | 0.6% |
| 7818 | 4 | 0.1% |
| 4877 | 4 | 0.1% |
| 11800 | 4 | 0.1% |
| 9867 | 4 | 0.1% |
| 7472 | 4 | 0.1% |
| 8544 | 4 | 0.1% |
| 4901 | 4 | 0.1% |
| 4452 | 3 | 0.1% |
| 8456 | 3 | 0.1% |
| Other values (3536) | 4203 |
| Value | Count | Frequency (%) |
| 0 | 24 | |
| 30 | 1 | < 0.1% |
| 38 | 1 | < 0.1% |
| 54 | 1 | < 0.1% |
| 55 | 1 | < 0.1% |
| 74 | 1 | < 0.1% |
| 87 | 1 | < 0.1% |
| 96 | 1 | < 0.1% |
| 104 | 1 | < 0.1% |
| 111 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 19106 | 1 | |
| 17471 | 1 | |
| 17228 | 1 | |
| 17089 | 1 | |
| 16523 | 1 | |
| 16518 | 1 | |
| 16485 | 1 | |
| 16354 | 1 | |
| 16317 | 1 | |
| 16006 | 1 |
| Distinct | 3007 |
|---|---|
| Distinct (%) | 70.6% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 3009.844205 |
| Minimum | 0 |
|---|---|
| Maximum | 28268 |
| Zeros | 14 |
| Zeros (%) | 0.3% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 645 |
| Q1 | 1648.25 |
| median | 2596 |
| Q3 | 3822 |
| 95-th percentile | 6507.9 |
| Maximum | 28268 |
| Range | 28268 |
| Interquartile range (IQR) | 2173.75 |
Descriptive statistics
| Standard deviation | 2139.228929 |
|---|---|
| Coefficient of variation (CV) | 0.710744073 |
| Kurtosis | 17.85873945 |
| Mean | 3009.844205 |
| Median Absolute Deviation (MAD) | 1064 |
| Skewness | 2.857204654 |
| Sum | 12827956 |
| Variance | 4576300.41 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 14 | 0.3% |
| 2498 | 7 | 0.2% |
| 1564 | 6 | 0.1% |
| 2235 | 6 | 0.1% |
| 2811 | 5 | 0.1% |
| 3077 | 5 | 0.1% |
| 2224 | 5 | 0.1% |
| 2149 | 5 | 0.1% |
| 3177 | 5 | 0.1% |
| 1441 | 4 | 0.1% |
| Other values (2997) | 4200 |
| Value | Count | Frequency (%) |
| 0 | 14 | |
| 11 | 1 | < 0.1% |
| 45 | 1 | < 0.1% |
| 50 | 3 | 0.1% |
| 52 | 1 | < 0.1% |
| 64 | 1 | < 0.1% |
| 68 | 1 | < 0.1% |
| 72 | 2 | < 0.1% |
| 76 | 1 | < 0.1% |
| 77 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 28268 | 1 | |
| 28168 | 1 | |
| 21690 | 1 | |
| 21290 | 1 | |
| 18699 | 1 | |
| 17606 | 1 | |
| 17090 | 1 | |
| 16905 | 1 | |
| 16709 | 1 | |
| 16435 | 1 |
length_LTR
Real number (ℝ≥0)
HIGH CORRELATIONHIGH CORRELATIONHIGH CORRELATIONHIGH CORRELATIONZEROS| Distinct | 2580 |
|---|---|
| Distinct (%) | 60.5% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 2489.054904 |
| Minimum | 0 |
|---|---|
| Maximum | 30612 |
| Zeros | 90 |
| Zeros (%) | 2.1% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 100 |
| Q1 | 493 |
| median | 1021.5 |
| Q3 | 2698 |
| 95-th percentile | 9890.4 |
| Maximum | 30612 |
| Range | 30612 |
| Interquartile range (IQR) | 2205 |
Descriptive statistics
| Standard deviation | 3667.208483 |
|---|---|
| Coefficient of variation (CV) | 1.473333705 |
| Kurtosis | 11.03197296 |
| Mean | 2489.054904 |
| Median Absolute Deviation (MAD) | 665.5 |
| Skewness | 2.957214714 |
| Sum | 10608352 |
| Variance | 13448418.06 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 90 | 2.1% |
| 471 | 8 | 0.2% |
| 301 | 8 | 0.2% |
| 431 | 7 | 0.2% |
| 385 | 7 | 0.2% |
| 105 | 7 | 0.2% |
| 550 | 7 | 0.2% |
| 165 | 7 | 0.2% |
| 365 | 7 | 0.2% |
| 475 | 6 | 0.1% |
| Other values (2570) | 4108 |
| Value | Count | Frequency (%) |
| 0 | 90 | |
| 10 | 1 | < 0.1% |
| 12 | 1 | < 0.1% |
| 14 | 1 | < 0.1% |
| 15 | 1 | < 0.1% |
| 18 | 1 | < 0.1% |
| 19 | 2 | < 0.1% |
| 20 | 3 | 0.1% |
| 22 | 2 | < 0.1% |
| 27 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 30612 | 1 | |
| 29999 | 1 | |
| 28337 | 1 | |
| 27196 | 1 | |
| 26948 | 1 | |
| 26589 | 1 | |
| 26257 | 1 | |
| 25281 | 1 | |
| 25125 | 1 | |
| 24787 | 1 |
| Distinct | 33 |
|---|---|
| Distinct (%) | 0.8% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 99618.36931 |
| Minimum | 790 |
|---|---|
| Maximum | 99999 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 790 |
|---|---|
| 5-th percentile | 99999 |
| Q1 | 99999 |
| median | 99999 |
| Q3 | 99999 |
| 95-th percentile | 99999 |
| Maximum | 99999 |
| Range | 99209 |
| Interquartile range (IQR) | 0 |
Descriptive statistics
| Standard deviation | 5054.936551 |
|---|---|
| Coefficient of variation (CV) | 0.05074301643 |
| Kurtosis | 237.3472155 |
| Mean | 99618.36931 |
| Median Absolute Deviation (MAD) | 0 |
| Skewness | -14.93793537 |
| Sum | 424573490 |
| Variance | 25552383.53 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 99999 | 4230 | |
| 19297 | 1 | < 0.1% |
| 79296 | 1 | < 0.1% |
| 78467 | 1 | < 0.1% |
| 62368 | 1 | < 0.1% |
| 39933 | 1 | < 0.1% |
| 60136 | 1 | < 0.1% |
| 99260 | 1 | < 0.1% |
| 26782 | 1 | < 0.1% |
| 4086 | 1 | < 0.1% |
| Other values (23) | 23 | 0.5% |
| Value | Count | Frequency (%) |
| 790 | 1 | |
| 4086 | 1 | |
| 5405 | 1 | |
| 7007 | 1 | |
| 15212 | 1 | |
| 15998 | 1 | |
| 16382 | 1 | |
| 19297 | 1 | |
| 26760 | 1 | |
| 26782 | 1 |
| Value | Count | Frequency (%) |
| 99999 | 4230 | |
| 99260 | 1 | < 0.1% |
| 96560 | 1 | < 0.1% |
| 94673 | 1 | < 0.1% |
| 90550 | 1 | < 0.1% |
| 79296 | 1 | < 0.1% |
| 78467 | 1 | < 0.1% |
| 74368 | 1 | < 0.1% |
| 74035 | 1 | < 0.1% |
| 72523 | 1 | < 0.1% |
| Distinct | 3015 |
|---|---|
| Distinct (%) | 70.7% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 3.017447978 |
| Minimum | 0 |
|---|---|
| Maximum | 28.26828268 |
| Zeros | 14 |
| Zeros (%) | 0.3% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 0.6520565206 |
| Q1 | 1.656266563 |
| median | 2.59802598 |
| Q3 | 3.824788248 |
| 95-th percentile | 6.536765368 |
| Maximum | 28.26828268 |
| Range | 28.26828268 |
| Interquartile range (IQR) | 2.168521685 |
Descriptive statistics
| Standard deviation | 2.143907978 |
|---|---|
| Coefficient of variation (CV) | 0.7105037081 |
| Kurtosis | 17.71547502 |
| Mean | 3.017447978 |
| Median Absolute Deviation (MAD) | 1.064510645 |
| Skewness | 2.852493441 |
| Sum | 12860.36328 |
| Variance | 4.596341417 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 14 | 0.3% |
| 2.49802498 | 7 | 0.2% |
| 1.56401564 | 6 | 0.1% |
| 2.23502235 | 6 | 0.1% |
| 3.07703077 | 5 | 0.1% |
| 2.81102811 | 5 | 0.1% |
| 2.22402224 | 5 | 0.1% |
| 3.17703177 | 5 | 0.1% |
| 2.14902149 | 5 | 0.1% |
| 2.31702317 | 4 | 0.1% |
| Other values (3005) | 4200 |
| Value | Count | Frequency (%) |
| 0 | 14 | |
| 0.01100011 | 1 | < 0.1% |
| 0.04500045 | 1 | < 0.1% |
| 0.05000050001 | 2 | < 0.1% |
| 0.05200052001 | 1 | < 0.1% |
| 0.06400064001 | 1 | < 0.1% |
| 0.06800068001 | 1 | < 0.1% |
| 0.07200072001 | 2 | < 0.1% |
| 0.07600076001 | 1 | < 0.1% |
| 0.07700077001 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 28.26828268 | 1 | |
| 28.16828168 | 1 | |
| 21.6902169 | 1 | |
| 21.2902129 | 1 | |
| 18.69918699 | 1 | |
| 17.60617606 | 1 | |
| 17.0901709 | 1 | |
| 16.90516905 | 1 | |
| 16.70916709 | 1 | |
| 16.43516435 | 1 |
| Distinct | 3717 |
|---|---|
| Distinct (%) | 87.2% |
| Missing | 1 |
| Missing (%) | < 0.1% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 10.28151654 |
| Minimum | 0 |
|---|---|
| Maximum | 28.61428614 |
| Zeros | 9 |
| Zeros (%) | 0.2% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 3.81103811 |
| Q1 | 7.268072681 |
| median | 10.04410044 |
| Q3 | 13.10713107 |
| 95-th percentile | 17.53117531 |
| Maximum | 28.61428614 |
| Range | 28.61428614 |
| Interquartile range (IQR) | 5.839058391 |
Descriptive statistics
| Standard deviation | 4.242424275 |
|---|---|
| Coefficient of variation (CV) | 0.4126263143 |
| Kurtosis | 0.1627838444 |
| Mean | 10.28151654 |
| Median Absolute Deviation (MAD) | 2.88302883 |
| Skewness | 0.3464568187 |
| Sum | 43809.54198 |
| Variance | 17.99816373 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 9 | 0.2% |
| 8.625086251 | 4 | 0.1% |
| 13.19213192 | 4 | 0.1% |
| 8.900089001 | 4 | 0.1% |
| 11.73511735 | 4 | 0.1% |
| 7.626076261 | 3 | 0.1% |
| 10.55510555 | 3 | 0.1% |
| 11.5801158 | 3 | 0.1% |
| 10.88110881 | 3 | 0.1% |
| 10.84410844 | 3 | 0.1% |
| Other values (3707) | 4221 |
| Value | Count | Frequency (%) |
| 0 | 9 | |
| 0.05000050001 | 1 | < 0.1% |
| 0.07200072001 | 1 | < 0.1% |
| 0.17500175 | 1 | < 0.1% |
| 0.1866925547 | 1 | < 0.1% |
| 0.24100241 | 1 | < 0.1% |
| 0.2500025 | 1 | < 0.1% |
| 0.34500345 | 1 | < 0.1% |
| 0.41200412 | 1 | < 0.1% |
| 0.48200482 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 28.61428614 | 1 | |
| 28.33228332 | 1 | |
| 27.32727327 | 1 | |
| 27.30227302 | 1 | |
| 26.87326873 | 1 | |
| 25.27425274 | 1 | |
| 25.00125001 | 1 | |
| 24.98424984 | 1 | |
| 24.7102471 | 1 | |
| 24.52524525 | 1 |
| Distinct | 3835 |
|---|---|
| Distinct (%) | 90.0% |
| Missing | 1 |
| Missing (%) | < 0.1% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 12.80545063 |
| Minimum | 0 |
|---|---|
| Maximum | 60.36379547 |
| Zeros | 4 |
| Zeros (%) | 0.1% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 5.167051671 |
| Q1 | 8.966089661 |
| median | 12.17312173 |
| Q3 | 16.02416024 |
| 95-th percentile | 22.27622276 |
| Maximum | 60.36379547 |
| Range | 60.36379547 |
| Interquartile range (IQR) | 7.058070581 |
Descriptive statistics
| Standard deviation | 5.39325079 |
|---|---|
| Coefficient of variation (CV) | 0.4211683716 |
| Kurtosis | 1.969924734 |
| Mean | 12.80545063 |
| Median Absolute Deviation (MAD) | 3.49103491 |
| Skewness | 0.7896843695 |
| Sum | 54564.02514 |
| Variance | 29.08715408 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 4 | 0.1% |
| 10.54210542 | 4 | 0.1% |
| 10.10710107 | 4 | 0.1% |
| 10.39410394 | 4 | 0.1% |
| 11.88611886 | 4 | 0.1% |
| 11.74711747 | 3 | 0.1% |
| 10.68210682 | 3 | 0.1% |
| 9.354093541 | 3 | 0.1% |
| 9.218092181 | 3 | 0.1% |
| 10.69310693 | 3 | 0.1% |
| Other values (3825) | 4226 |
| Value | Count | Frequency (%) |
| 0 | 4 | |
| 0.07200072001 | 1 | < 0.1% |
| 0.09400094001 | 1 | < 0.1% |
| 0.10300103 | 1 | < 0.1% |
| 0.1866925547 | 1 | < 0.1% |
| 0.24100241 | 1 | < 0.1% |
| 0.26200262 | 1 | < 0.1% |
| 0.4657801818 | 1 | < 0.1% |
| 0.6070060701 | 1 | < 0.1% |
| 1.10901109 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 60.36379547 | 1 | |
| 37.94737947 | 1 | |
| 37.23737237 | 1 | |
| 35.10135101 | 1 | |
| 34.9503495 | 1 | |
| 34.61334613 | 1 | |
| 33.94333943 | 1 | |
| 33.75633756 | 1 | |
| 33.68533685 | 1 | |
| 33.16433164 | 1 |
| Distinct | 4039 |
|---|---|
| Distinct (%) | 94.8% |
| Missing | 1 |
| Missing (%) | < 0.1% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 27.78898948 |
| Minimum | 0 |
|---|---|
| Maximum | 92.24450955 |
| Zeros | 1 |
| Zeros (%) | < 0.1% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 11.61411614 |
| Q1 | 19.27519275 |
| median | 26.39826398 |
| Q3 | 34.63734637 |
| 95-th percentile | 48.68648686 |
| Maximum | 92.24450955 |
| Range | 92.24450955 |
| Interquartile range (IQR) | 15.36215362 |
Descriptive statistics
| Standard deviation | 12.03590237 |
|---|---|
| Coefficient of variation (CV) | 0.4331176697 |
| Kurtosis | 2.025386464 |
| Mean | 27.78898948 |
| Median Absolute Deviation (MAD) | 7.567075671 |
| Skewness | 1.037073135 |
| Sum | 118408.8842 |
| Variance | 144.8629458 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 23.86123861 | 3 | 0.1% |
| 14.21814218 | 3 | 0.1% |
| 28.8602886 | 3 | 0.1% |
| 20.5302053 | 3 | 0.1% |
| 28.92528925 | 3 | 0.1% |
| 17.73717737 | 3 | 0.1% |
| 26.78426784 | 3 | 0.1% |
| 21.92521925 | 3 | 0.1% |
| 35.12235122 | 3 | 0.1% |
| 32.41632416 | 3 | 0.1% |
| Other values (4029) | 4231 |
| Value | Count | Frequency (%) |
| 0 | 1 | |
| 2.04702047 | 1 | |
| 2.6900269 | 1 | |
| 3.37303373 | 1 | |
| 3.56603566 | 1 | |
| 4.06804068 | 1 | |
| 4.14704147 | 1 | |
| 4.25204252 | 1 | |
| 4.42704427 | 1 | |
| 4.49704497 | 1 |
| Value | Count | Frequency (%) |
| 92.24450955 | 1 | |
| 91.50591506 | 1 | |
| 88.3402312 | 1 | |
| 86.64886649 | 1 | |
| 86.36386364 | 1 | |
| 84.91084911 | 1 | |
| 82.29482295 | 1 | |
| 81.79581796 | 1 | |
| 78.25878259 | 1 | |
| 76.75376754 | 1 |
| Distinct | 4087 |
|---|---|
| Distinct (%) | 95.9% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 37.44999224 |
| Minimum | 0 |
|---|---|
| Maximum | 96.85974006 |
| Zeros | 1 |
| Zeros (%) | < 0.1% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 17.32922329 |
| Q1 | 27.26452265 |
| median | 36.31636316 |
| Q3 | 46.08146081 |
| 95-th percentile | 62.6498265 |
| Maximum | 96.85974006 |
| Range | 96.85974006 |
| Interquartile range (IQR) | 18.81693817 |
Descriptive statistics
| Standard deviation | 13.80270056 |
|---|---|
| Coefficient of variation (CV) | 0.3685635091 |
| Kurtosis | 0.3122330378 |
| Mean | 37.44999224 |
| Median Absolute Deviation (MAD) | 9.364593646 |
| Skewness | 0.5650704772 |
| Sum | 159611.8669 |
| Variance | 190.5145427 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 42.20442204 | 3 | 0.1% |
| 37.62337623 | 3 | 0.1% |
| 28.09928099 | 3 | 0.1% |
| 40.68540685 | 3 | 0.1% |
| 42.6204262 | 3 | 0.1% |
| 29.97729977 | 3 | 0.1% |
| 43.54543545 | 3 | 0.1% |
| 26.1402614 | 2 | < 0.1% |
| 58.96558966 | 2 | < 0.1% |
| 51.06751068 | 2 | < 0.1% |
| Other values (4077) | 4235 |
| Value | Count | Frequency (%) |
| 0 | 1 | |
| 4.94504945 | 1 | |
| 5.120051201 | 1 | |
| 5.876058761 | 1 | |
| 6.194061941 | 1 | |
| 6.507065071 | 1 | |
| 6.691066911 | 1 | |
| 6.898068981 | 1 | |
| 7.857078571 | 1 | |
| 8.130081301 | 1 |
| Value | Count | Frequency (%) |
| 96.85974006 | 1 | |
| 96.53196532 | 1 | |
| 94.81194812 | 1 | |
| 91.11891119 | 1 | |
| 88.80788808 | 1 | |
| 88.3402312 | 1 | |
| 87.79587796 | 1 | |
| 86.13586136 | 1 | |
| 83.67883679 | 1 | |
| 83.46383464 | 1 |
| Distinct | 2828 |
|---|---|
| Distinct (%) | 66.4% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 3.714060184 |
| Minimum | 0 |
|---|---|
| Maximum | 26.50126501 |
| Zeros | 1012 |
| Zeros (%) | 23.7% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 33.4 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 0 |
| Q1 | 0.20300203 |
| median | 2.20902209 |
| Q3 | 5.653556536 |
| 95-th percentile | 12.73742737 |
| Maximum | 26.50126501 |
| Range | 26.50126501 |
| Interquartile range (IQR) | 5.450554506 |
Descriptive statistics
| Standard deviation | 4.358827368 |
|---|---|
| Coefficient of variation (CV) | 1.173601706 |
| Kurtosis | 2.99931233 |
| Mean | 3.714060184 |
| Median Absolute Deviation (MAD) | 2.20902209 |
| Skewness | 1.650159454 |
| Sum | 15829.3245 |
| Variance | 18.99937602 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0 | 1012 | 23.7% |
| 1.16401164 | 5 | 0.1% |
| 0.48800488 | 4 | 0.1% |
| 0.38100381 | 4 | 0.1% |
| 1.70201702 | 4 | 0.1% |
| 1.1800118 | 4 | 0.1% |
| 2.32402324 | 4 | 0.1% |
| 0.6350063501 | 4 | 0.1% |
| 0.6830068301 | 4 | 0.1% |
| 2.27402274 | 4 | 0.1% |
| Other values (2818) | 3213 |
| Value | Count | Frequency (%) |
| 0 | 1012 | |
| 0.009000090001 | 1 | < 0.1% |
| 0.0100001 | 1 | < 0.1% |
| 0.01100011 | 1 | < 0.1% |
| 0.01200012 | 2 | < 0.1% |
| 0.01500015 | 1 | < 0.1% |
| 0.01800018 | 1 | < 0.1% |
| 0.0200002 | 1 | < 0.1% |
| 0.02100021 | 2 | < 0.1% |
| 0.02200022 | 1 | < 0.1% |
| Value | Count | Frequency (%) |
| 26.50126501 | 1 | |
| 26.15726157 | 1 | |
| 26.03826038 | 1 | |
| 25.79425794 | 1 | |
| 25.60125601 | 1 | |
| 24.4302443 | 1 | |
| 24.37624376 | 1 | |
| 24.12624126 | 1 | |
| 23.84923849 | 1 | |
| 23.84523845 | 1 |
Spearman's ρ
The Spearman's rank correlation coefficient (ρ) is a measure of monotonic correlation between two variables, and is therefore better in catching nonlinear monotonic correlations than Pearson's r. It's value lies between -1 and +1, -1 indicating total negative monotonic correlation, 0 indicating no monotonic correlation and 1 indicating total positive monotonic correlation.To calculate ρ for two variables X and Y, one divides the covariance of the rank variables of X and Y by the product of their standard deviations.
Pearson's r
The Pearson's correlation coefficient (r) is a measure of linear correlation between two variables. It's value lies between -1 and +1, -1 indicating total negative linear correlation, 0 indicating no linear correlation and 1 indicating total positive linear correlation. Furthermore, r is invariant under separate changes in location and scale of the two variables, implying that for a linear function the angle to the x-axis does not affect r.To calculate r for two variables X and Y, one divides the covariance of X and Y by the product of their standard deviations.
Kendall's τ
Similarly to Spearman's rank correlation coefficient, the Kendall rank correlation coefficient (τ) measures ordinal association between two variables. It's value lies between -1 and +1, -1 indicating total negative correlation, 0 indicating no correlation and 1 indicating total positive correlation.To calculate τ for two variables X and Y, one determines the number of concordant and discordant pairs of observations. τ is given by the number of concordant pairs minus the discordant pairs divided by the total number of pairs.
Phik (φk)
Phik (φk) is a new and practical correlation coefficient that works consistently between categorical, ordinal and interval variables, captures non-linear dependency and reverts to the Pearson correlation coefficient in case of a bivariate normal input distribution. There is extensive documentation available here.First rows
| chrom | begin | end | length_gene | length_rpt | length_LINE | length_SINE | length_DNA | length_LTR | block_len | per_DNA | per_SINE | per_LTR | per_LINE | per_length | per_gene | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | LR999924.1 | 1 | 100000 | 6807 | 87795.0 | 81533.0 | 0.0 | 50 | 212.0 | 99999 | 0.050001 | 0.050001 | 0.262003 | 81.795818 | 87.795878 | 6.807068 |
| 1 | LR999924.1 | 100001 | 200000 | 12634 | 34898.0 | 16750.0 | 2711.0 | 4085 | 1215.0 | 99999 | 4.085041 | 6.796068 | 8.011080 | 24.761248 | 34.898349 | 12.634126 |
| 2 | LR999924.1 | 200001 | 300000 | 25794 | 10577.0 | 3534.0 | 1514.0 | 809 | 601.0 | 99999 | 0.809008 | 2.323023 | 2.924029 | 6.458065 | 10.577106 | 25.794258 |
| 3 | LR999924.1 | 300001 | 400000 | 2683 | 15688.0 | 6128.0 | 3287.0 | 2835 | 105.0 | 99999 | 2.835028 | 6.122061 | 6.227062 | 12.355124 | 15.688157 | 2.683027 |
| 4 | LR999924.1 | 400001 | 500000 | 7343 | 13046.0 | 4109.0 | 2529.0 | 1481 | 0.0 | 99999 | 1.481015 | 4.010040 | 4.010040 | 8.119081 | 13.046130 | 7.343073 |
| 5 | LR999924.1 | 500001 | 600000 | 6706 | 16456.0 | 5859.0 | 4461.0 | 293 | 357.0 | 99999 | 0.293003 | 4.754048 | 5.111051 | 10.970110 | 16.456165 | 6.706067 |
| 6 | LR999924.1 | 600001 | 700000 | 0 | 24316.0 | 10325.0 | 5439.0 | 2210 | 798.0 | 99999 | 2.210022 | 7.649076 | 8.447084 | 18.772188 | 24.316243 | 0.000000 |
| 7 | LR999924.1 | 700001 | 800000 | 10256 | 18682.0 | 6959.0 | 3697.0 | 1695 | 0.0 | 99999 | 1.695017 | 5.392054 | 5.392054 | 12.351124 | 18.682187 | 10.256103 |
| 8 | LR999924.1 | 800001 | 900000 | 5638 | 22796.0 | 6732.0 | 4262.0 | 3259 | 1122.0 | 99999 | 3.259033 | 7.521075 | 8.643086 | 15.375154 | 22.796228 | 5.638056 |
| 9 | LR999924.1 | 900001 | 1000000 | 2532 | 27620.0 | 7654.0 | 6879.0 | 4290 | 686.0 | 99999 | 4.290043 | 11.169112 | 11.855119 | 19.509195 | 27.620276 | 2.532025 |
Last rows
| chrom | begin | end | length_gene | length_rpt | length_LINE | length_SINE | length_DNA | length_LTR | block_len | per_DNA | per_SINE | per_LTR | per_LINE | per_length | per_gene | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4252 | LR999955.1 | 5200001 | 5300000 | 2569 | 54826.0 | 18955.0 | 11045.0 | 6506 | 1261.0 | 99999 | 6.506065 | 17.551176 | 18.812188 | 37.767378 | 54.826548 | 2.569026 |
| 4253 | LR999955.1 | 5300001 | 5400000 | 8707 | 58502.0 | 17374.0 | 8331.0 | 6842 | 9333.0 | 99999 | 6.842068 | 15.173152 | 24.506245 | 41.880419 | 58.502585 | 8.707087 |
| 4254 | LR999955.1 | 5400001 | 5500000 | 2933 | 58354.0 | 21659.0 | 9106.0 | 6264 | 2985.0 | 99999 | 6.264063 | 15.370154 | 18.355184 | 40.014400 | 58.354584 | 2.933029 |
| 4255 | LR999955.1 | 5500001 | 5600000 | 1921 | 43907.0 | 15371.0 | 11011.0 | 2563 | 800.0 | 99999 | 2.563026 | 13.574136 | 14.374144 | 29.745297 | 43.907439 | 1.921019 |
| 4256 | LR999955.1 | 5600001 | 5700000 | 8638 | 54464.0 | 16233.0 | 10521.0 | 6261 | 3831.0 | 99999 | 6.261063 | 16.782168 | 20.613206 | 36.846368 | 54.464545 | 8.638086 |
| 4257 | LR999955.1 | 5700001 | 5800000 | 1107 | 69323.0 | 32035.0 | 10528.0 | 5130 | 7569.0 | 99999 | 5.130051 | 15.658157 | 23.227232 | 55.262553 | 69.323693 | 1.107011 |
| 4258 | LR999955.1 | 5800001 | 5900000 | 3029 | 69397.0 | 21158.0 | 9324.0 | 1876 | 8124.0 | 99999 | 1.876019 | 11.200112 | 19.324193 | 40.482405 | 69.397694 | 3.029030 |
| 4259 | LR999955.1 | 5900001 | 6000000 | 164 | 66234.0 | 21179.0 | 746.0 | 4679 | 11839.0 | 99999 | 4.679047 | 5.425054 | 17.264173 | 38.443384 | 66.234662 | 0.164002 |
| 4260 | LR999955.1 | 6000001 | 6100000 | 0 | 51067.0 | 17755.0 | 2374.0 | 2101 | 8154.0 | 99999 | 2.101021 | 4.475045 | 12.629126 | 30.384304 | 51.067511 | 0.000000 |
| 4261 | LR999955.1 | 6100001 | 6166334 | 164 | 42720.0 | 13392.0 | 267.0 | 2778 | 9509.0 | 66333 | 4.187961 | 4.590475 | 18.925723 | 39.114769 | 64.402334 | 0.247237 |